Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGCCTTAATTGAAGGGGTTTGGGTGG
(((((((((((((..((((((.&)))))).....)))))))))..)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001306153
GeneSymbolCCT5
Binding site1929,1956
Score1.0
Seed1
Au0.647
Energy-21.4
Binding len27
Me-5.53
Phylopstem0.25957519333333345
Phylopflank-0.19452867249999994
Longest consecutive pairings9
Position of longest consecutive pairings7
Pairings in 3prime end6
Position3UTR
2D Structure