Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGCCTTAATTGAAGGGGTTTGGGTGG
(((((((((((((..((((((.&)))))).....)))))))))..)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001306154
GeneSymbolCCT5
Binding site1805,1832
Score0.885
Seed1
Au0.647
Energy-21.4
Binding len27
Me-5.53
Phylopstem4.267999246666667
Phylopflank5.4507025175
Longest consecutive pairings9
Position of longest consecutive pairings7
Pairings in 3prime end6
Position3UTR
2D Structure