Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCCACCACAGAATTATGGGATGCCTTAAGTGC
(((((((((((((((((((.((&)).))).)))))....)))).)))...)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001306154
GeneSymbolCCT5
Binding site1971,2003
Score0.846
Seed1
Au0.515
Energy-20.4
Binding len32
Me-3.938
Phylopstem0.5296940321428572
Phylopflank0.5062020462499999
Longest consecutive pairings5
Position of longest consecutive pairings20
Pairings in 3prime end7
Position3UTR
2D Structure