Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTATCAGAGGGACACAGTGA
(((((..(((.((((.(((((.&))))))))))))..))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001306154
GeneSymbolCCT5
Binding site2188,2208
Score0.846
Seed0
Au0.588
Energy-19.8
Binding len20
Me-10.44
Phylopstem-1.5274224
Phylopflank-0.11770937249999998
Longest consecutive pairings12
Position of longest consecutive pairings8
Pairings in 3prime end6
Position3UTR
2D Structure