Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&ACAGAGTGTGCCGGT
..(((((((((..(((......&)))..))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001306179
GeneSymbolHNF1A
Binding site1554,1569
Score0.923
Seed1
Au0.353
Energy-17.6
Binding len15
Me-9.593
Phylopstem3.3214401111111105
Phylopflank3.3454092875
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end2
PositionCDS
2D Structure