Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&ATCTGCTGTTGTGTGCTTTTAGTTGTTGGATAACTGAGGTC
((((((((((((((((((((..&)))))).))))))))))...................)))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001307922
GeneSymbolRWDD4
Binding site1613,1654
Score0.923
Seed1
Au0.618
Energy-19.4
Binding len41
Me-3.938
Phylopstem1.2639194099999995
Phylopflank1.14429589875
Longest consecutive pairings10
Position of longest consecutive pairings24
Pairings in 3prime end6
Position3UTR
2D Structure