Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTTGCACTGTCGCCCAGGCTGGAGTGCAGTGG
((((((((((..(((((((...&.)))))))..))))).))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001307929
GeneSymbolEIF3M
Binding site3266,3299
Score0.846
Seed1
Au0.382
Energy-27.3
Binding len22
Me-10.109
Phylopstem0.06129072727272727
Phylopflank-0.04917010874999999
Longest consecutive pairings7
Position of longest consecutive pairings14
Pairings in 3prime end5
Position3UTR
2D Structure