Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&ACCTGGGAGGCAGAGCTTGCAGTGA
(((((((((((((((((((...&))))))))))..))))...))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001307932
GeneSymbolCOMMD9
Binding site1627,1652
Score0.846
Seed1
Au0.397
Energy-22.5
Binding len25
Me-3.938
Phylopstem-0.08120363333333334
Phylopflank0.24149528124999997
Longest consecutive pairings10
Position of longest consecutive pairings15
Pairings in 3prime end5
Position3UTR
2D Structure