Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GGGAGGCTGAGGCAGGA
....(((((((((((((....&))))))))...))))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_001307932
GeneSymbolCOMMD9
Binding site1599,1616
Score0.808
Seed0
Au0.382
Energy-22.4
Binding len17
Me-9.547
Phylopstem-0.4044125062499999
Phylopflank-0.06572844
Longest consecutive pairings8
Position of longest consecutive pairings9
Pairings in 3prime end4
Position3UTR
2D Structure