Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCCGGGAAGACCCAATCAGAGCTGGTGA
((((((((((((((((((....&))))))))).........))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001307941
GeneSymbolSEC11C
Binding site315,343
Score0.923
Seed1
Au0.574
Energy-22.5
Binding len28
Me-3.938
Phylopstem5.108025096296296
Phylopflank5.9893393325
Longest consecutive pairings9
Position of longest consecutive pairings19
Pairings in 3prime end4
PositionCDS
2D Structure