Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTACCCTAGAGTCCCTGTTGGTGG
(((((((....((((((((((.&)))))).)))).....))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001307943
GeneSymbolTTC17
Binding site1561,1585
Score0.846
Seed1
Au0.5
Energy-20.5
Binding len24
Me-11.375
Phylopstem2.3959857272727265
Phylopflank3.58202864375
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure