Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GAATTTAGATTGCCTGCCAGC
..((((((..((((.(((((((&))))))).))))..)))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001307945
GeneSymbolCHRNA5
Binding site2727,2748
Score0.846
Seed1
Au0.544
Energy-18.7
Binding len21
Me-7.991
Phylopstem0.497255
Phylopflank0.0439723575
Longest consecutive pairings7
Position of longest consecutive pairings14
Pairings in 3prime end7
Position3UTR
2D Structure