Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCAGCATTCCAGAAAGGAGACTAA
...(((((((((((((((....&.)))))))))))).))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001307951
GeneSymbolLPXN
Binding site227,251
Score0.923
Seed0
Au0.529
Energy-22.3
Binding len18
Me-6.515
Phylopstem0.09327259125000004
Phylopflank-0.4256352805
Longest consecutive pairings12
Position of longest consecutive pairings5
Pairings in 3prime end4
PositionCDS
2D Structure