Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTGCCCTCTGAGGATGAAGAAGGTCAGG
..((((((((((...(((((((&)))))))...)))))........))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001347701
GeneSymbolSYNE1
Binding site1742,1771
Score0.846
Seed1
Au0.471
Energy-22.2
Binding len29
Me-7.838
Phylopstem5.4213602666666665
Phylopflank4.841135897499999
Longest consecutive pairings7
Position of longest consecutive pairings22
Pairings in 3prime end7
PositionCDS
2D Structure