Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTGCATTCTGTCGGGC
.(((((((...((((((((...&)))))))).))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001307960
GeneSymbolTM2D3
Binding site90,107
Score0.846
Seed1
Au0.485
Energy-18.4
Binding len17
Me-8.917
Phylopstem0.3779595275
Phylopflank0.25580477099999993
Longest consecutive pairings8
Position of longest consecutive pairings9
Pairings in 3prime end5
PositionCDS
2D Structure