Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCCAAGATCCAGAAAGGAACACAGTC
.(((((.((((((((((((...&.)))))))))))).).)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001307960
GeneSymbolTM2D3
Binding site825,851
Score0.846
Seed0
Au0.515
Energy-23.7
Binding len21
Me-5.337
Phylopstem4.525290375
Phylopflank4.01100484625
Longest consecutive pairings12
Position of longest consecutive pairings8
Pairings in 3prime end5
Position3UTR
2D Structure