Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCCCGTGGAGTGCCTGTCTTAGACCTGTTCCTTGCCCAGGAGGCTGAGCGGCTGAGGAAACAGACTGGGGCAGTGG
(((((.(((((((((((((((.&.)))))))))))).......................))).))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001307978
GeneSymbolTRABD2A
Binding site588,664
Score0.923
Seed0
Au0.426
Energy-26.7
Binding len46
Me-5.839
Phylopstem0.16778187631578953
Phylopflank0.24027346000000008
Longest consecutive pairings12
Position of longest consecutive pairings33
Pairings in 3prime end7
PositionCDS
2D Structure