Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TGCCCGGGTCAGAGGAAGGGGCAGGTC
.(((.(((((((((((((((..&))))).......)))))))))).))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001307980
GeneSymbolDNAJC4
Binding site217,244
Score0.846
Seed0
Au0.324
Energy-22.6
Binding len27
Me-7.912
Phylopstem-0.014326868181818182
Phylopflank-0.5512192349999998
Longest consecutive pairings10
Position of longest consecutive pairings5
Pairings in 3prime end6
Position5UTR
2D Structure