Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTACAACGAAGCCCGGGCACGGGCCAGG
..(((((((...(((((((...&.)))))))...))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001307980
GeneSymbolDNAJC4
Binding site1012,1041
Score0.846
Seed1
Au0.397
Energy-23.9
Binding len19
Me-12.371
Phylopstem3.5650616
Phylopflank1.534327045
Longest consecutive pairings7
Position of longest consecutive pairings11
Pairings in 3prime end5
PositionCDS
2D Structure