Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GAGTGCTCATGTTGTGCCAGGC
.(((((((((..(((.((((((&)))).)))))..))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001307986
GeneSymbolST8SIA5
Binding site5414,5436
Score0.846
Seed1
Au0.544
Energy-18.9
Binding len22
Me-10.198
Phylopstem-0.32797691111111116
Phylopflank0.11696044149999998
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure