Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTACATATGCCGTGGTG
((((((((((...(((((....&)))))))))))).))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001307990
GeneSymbolMAP4K2
Binding site5352,5369
Score0.846
Seed1
Au0.471
Energy-17.1
Binding len17
Me-11.398
Phylopstem2.706224454545455
Phylopflank2.9303093799999997
Longest consecutive pairings12
Position of longest consecutive pairings5
Pairings in 3prime end4
Position3UTR
2D Structure