Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GAATCTTCGCCAGCATTTGTCTTGTGAAAATGCCATTGTGTGCTGGA
..(((((((((((((.......&.))))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001308007
GeneSymbolEED
Binding site1499,1546
Score0.923
Seed1
Au0.574
Energy-18.6
Binding len15
Me-5.19
Phylopstem6.108247110769231
Phylopflank6.079107592499998
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end1
PositionCDS
2D Structure