Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCCAGGGTGAGCCATGTT
.((((((((..((((((((...&)))))))).)))))).)).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001308014
GeneSymbolSLCO6A1
Binding site143,162
Score0.846
Seed1
Au0.25
Energy-23.1
Binding len19
Me-7.861
Phylopstem-0.36901663749999997
Phylopflank0.31878199375
Longest consecutive pairings8
Position of longest consecutive pairings11
Pairings in 3prime end5
Position5UTR
2D Structure