Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GAATCTATTTTACTGTTGTTTATTGTTGAATCTGTGTGTCAGCCAGGA
.(((((((((((...(((((((&.))))))))))))..)))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001308022
GeneSymbolTNS1
Binding site8226,8274
Score0.923
Seed1
Au0.515
Energy-18.9
Binding len22
Me-6.675
Phylopstem2.117883307692308
Phylopflank2.49582403875
Longest consecutive pairings12
Position of longest consecutive pairings9
Pairings in 3prime end7
Position3UTR
2D Structure