Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTGCTCAGTGAGGCTCCGGCCAGA
..((((((((((.(((((((((&))))))))).))))....)))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001308022
GeneSymbolTNS1
Binding site6579,6604
Score1.0
Seed1
Au0.441
Energy-27.2
Binding len25
Me-6.246
Phylopstem2.973023285714286
Phylopflank2.7298800112500006
Longest consecutive pairings9
Position of longest consecutive pairings16
Pairings in 3prime end8
Position3UTR
2D Structure