Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGTGTAGCCGGCAGCCTGCAT
.((((((((((((((..((((&))))...)))))).)))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_047425997
GeneSymbolCDHR1
Binding site5789,5813
Score0.923
Seed1
Au0.397
Energy-23.6
Binding len24
Me-4.026
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings6
Position of longest consecutive pairings11
Pairings in 3prime end6
Position3UTR
2D Structure