Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTACATTGCCCTTGACCTCACTTGGGAGGAAGACAGATGCCAAGGG
.((((((((.(((((((((...&)))))))))............................)))))).)).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001308100
GeneSymbolSNCAIP
Binding site4206,4253
Score0.923
Seed1
Au0.426
Energy-18.0
Binding len47
Me-5.036
Phylopstem1.032892
Phylopflank3.2624166149999994
Longest consecutive pairings9
Position of longest consecutive pairings38
Pairings in 3prime end5
PositionCDS
2D Structure