Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGTGGCCGCCGCAGCCGCC
..((.((((((((.((.(((.&)))...)).)))))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDXM_047426112
GeneSymbolLOC124902392
Binding site2246,2267
Score0.846
Seed0
Au0.338
Energy-22.4
Binding len21
Me-9.933
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings4
Pairings in 3prime end5
PositionCDS
2D Structure