Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTCAAAAATAGTGCCAGGTC
(((((((((.............&.))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001308120
GeneSymbolTOGARAM1
Binding site6307,6328
Score1.0
Seed1
Au0.603
Energy-15.9
Binding len11
Me-14.466
Phylopstem2.612171777777778
Phylopflank2.1089034537500004
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end0
Position3UTR
2D Structure