Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GGATCTACAAGGTGCTGTCGGGA
.((((((((((..(((((((((&)))))))))..))).))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001308142
GeneSymbolMRTFB
Binding site7841,7864
Score1.0
Seed1
Au0.632
Energy-22.2
Binding len23
Me-8.429
Phylopstem1.1635452727272726
Phylopflank0.18986126500000006
Longest consecutive pairings9
Position of longest consecutive pairings14
Pairings in 3prime end8
Position3UTR
2D Structure