Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GAAGTCCAAGCAGAAGACAATATCTACATTGAGAATAGTCTTTATGCCACGGA
.(((((((((((((((((((..&.))))))))))...........))))))).)).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001308156
GeneSymbolHAVCR1
Binding site1333,1386
Score0.846
Seed1
Au0.588
Energy-21.7
Binding len33
Me-3.793
Phylopstem0.5965343451612901
Phylopflank0.20290280249999992
Longest consecutive pairings10
Position of longest consecutive pairings22
Pairings in 3prime end6
PositionCDS
2D Structure