Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TTTGCCCAGGCAGAACCATGAACCAGTA
.(((((.((((.((((((((((&)))))))))).))......)).))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001308156
GeneSymbolHAVCR1
Binding site976,1004
Score0.846
Seed0
Au0.441
Energy-20.1
Binding len28
Me-8.684
Phylopstem-0.13430000000000003
Phylopflank-0.4417318775
Longest consecutive pairings10
Position of longest consecutive pairings18
Pairings in 3prime end8
PositionCDS
2D Structure