Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TTACCCAGCATTGTGAGTGA
((((.((......((((((((.&))))))))....)).)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001308156
GeneSymbolHAVCR1
Binding site158,178
Score0.846
Seed0
Au0.485
Energy-18.7
Binding len20
Me-20.13
Phylopstem-0.480746875
Phylopflank-0.2558338025
Longest consecutive pairings8
Position of longest consecutive pairings12
Pairings in 3prime end7
Position5UTR
2D Structure