Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTGCGTGCCAGGC
.((((((((.....((((....&)))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001308159
GeneSymbolTGFA
Binding site275,288
Score0.846
Seed1
Au0.397
Energy-16.9
Binding len13
Me-13.353
Phylopstem1.89552825
Phylopflank1.83776458375
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure