Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCCAGAGGAGGAGTTTGGCCAGGTGG
(((((((((((((((((((...&)))))))).)))).....))))).)).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001308159
GeneSymbolTGFA
Binding site706,733
Score0.846
Seed1
Au0.471
Energy-25.9
Binding len27
Me-3.938
Phylopstem0.16406914999999997
Phylopflank-0.04003467500000001
Longest consecutive pairings8
Position of longest consecutive pairings19
Pairings in 3prime end5
Position3UTR
2D Structure