Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCCAGAGGAGAAGAATAGCTGTGCCAGTGA
(((((((((.(((((((((...&))))))))).))...........))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001308160
GeneSymbolPCNX1
Binding site1698,1729
Score1.0
Seed1
Au0.515
Energy-24.9
Binding len31
Me-5.18
Phylopstem1.1458685333333334
Phylopflank1.94141138375
Longest consecutive pairings9
Position of longest consecutive pairings22
Pairings in 3prime end5
PositionCDS
2D Structure