Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCTGAAGGAGCCCATGTGG
(((.(((((((((..((((...&)))))))))))))...))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001308163
GeneSymbolSP140L
Binding site1416,1436
Score0.923
Seed0
Au0.544
Energy-22.3
Binding len20
Me-8.562
Phylopstem-0.01767437777777777
Phylopflank0.26971497425
Longest consecutive pairings13
Position of longest consecutive pairings7
Pairings in 3prime end4
PositionCDS
2D Structure