Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCCAGAGAGGATGCGGTGC
(((((..((((((((((((...&))))))))))))..))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001308173
GeneSymbolCCNJL
Binding site186,206
Score0.923
Seed0
Au0.265
Energy-29.4
Binding len20
Me-7.382
Phylopstem0.1275696666666667
Phylopflank0.05401595000000005
Longest consecutive pairings12
Position of longest consecutive pairings8
Pairings in 3prime end5
Position5UTR
2D Structure