Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTACCCAGCTTCCAGCAGGAGAACCACCCCAGAGAGCCGGTGT
(((((((((((..((((((((.&))))))))......................)).))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001308173
GeneSymbolCCNJL
Binding site4221,4264
Score0.923
Seed1
Au0.412
Energy-27.4
Binding len43
Me-8.574
Phylopstem-0.11457741666666665
Phylopflank0.5989839237499999
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure