Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTACCCAGGGAGGGAGAAGCTCGTT
.((.(((((((((((((((((.&)))))))))))))....)))).)).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001308173
GeneSymbolCCNJL
Binding site2317,2342
Score0.815
Seed0
Au0.603
Energy-26.7
Binding len25
Me-6.825
Phylopstem-0.6377141238095236
Phylopflank-0.35504490875000005
Longest consecutive pairings13
Position of longest consecutive pairings12
Pairings in 3prime end7
Position3UTR
2D Structure