Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTGTATTGTGTACCAGA
..((((.((((((((((((...&)))))))))))).)))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001308176
GeneSymbolCDH2
Binding site3831,3849
Score0.821
Seed0
Au0.559
Energy-17.7
Binding len18
Me-6.501
Phylopstem2.1762159816666666
Phylopflank2.02002907175
Longest consecutive pairings12
Position of longest consecutive pairings6
Pairings in 3prime end5
Position3UTR
2D Structure