Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTCCCAGGCTGGAGTGCAGTGG
((((((((((..((((((.(((&)))))))))..))))).))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001308185
GeneSymbolCCNL1
Binding site2474,2497
Score0.923
Seed1
Au0.412
Energy-27.1
Binding len23
Me-10.109
Phylopstem-0.7035579454545454
Phylopflank-0.27561892625
Longest consecutive pairings9
Position of longest consecutive pairings14
Pairings in 3prime end7
Position3UTR
2D Structure