Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTCCCCAGACGGACACCTTTTTCAAGTTGAATATGCCCAGGAAGCGGTGA
(((((....(((((((((((..&.)))))))))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001308188
GeneSymbolPSMA8
Binding site131,182
Score0.923
Seed0
Au0.544
Energy-21.6
Binding len18
Me-10.752
Phylopstem4.545229636363636
Phylopflank3.9917749875
Longest consecutive pairings16
Position of longest consecutive pairings1
Pairings in 3prime end6
Position5UTR
2D Structure