Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GTGTATTTTATGATTGGTATTATGGAAGGCTTATTGGGGG
...(((((.((((((((....&.))))))))...))))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_001308188
GeneSymbolPSMA8
Binding site1693,1733
Score1.0
Seed0
Au0.691
Energy-20.5
Binding len18
Me-7.571
Phylopstem0.3495603825
Phylopflank0.16460891800000002
Longest consecutive pairings8
Position of longest consecutive pairings9
Pairings in 3prime end4
Position3UTR
2D Structure