Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGTCACTCCTTCCCAGAAGGAGCCAA
...(((((((.(((((((.((.&.)).)))))))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001308195
GeneSymbolSIMC1
Binding site341,368
Score0.974
Seed0
Au0.5
Energy-27.8
Binding len19
Me-9.339
Phylopstem0.2696382857142857
Phylopflank0.6972021624999999
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure