Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AATCAGCTGATTGTGTGCCAGC
..((((((((((((.(((....&.))))))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001308196
GeneSymbolSIMC1
Binding site2327,2349
Score1.0
Seed1
Au0.5
Energy-20.2
Binding len17
Me-5.692
Phylopstem0.298571975
Phylopflank0.36303489375
Longest consecutive pairings15
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure