Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GTGGGAAGATAGAAAGCTGTCTAGGACTCACGGGGTTC
.(((((((((((((((((((.&)))))))).......)))))...........)))))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_001308210
GeneSymbolTSHZ1
Binding site4882,4920
Score1.0
Seed1
Au0.515
Energy-24.9
Binding len38
Me-3.793
Phylopstem1.5468466945945945
Phylopflank1.2449678768749997
Longest consecutive pairings8
Position of longest consecutive pairings30
Pairings in 3prime end7
Position3UTR
2D Structure