Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCAGGGAGGCAGCAGCTGCAT
.(((((((((.(((....(((&)))......))).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_047426194
GeneSymbolNR1H3
Binding site1314,1337
Score0.923
Seed1
Au0.353
Energy-21.3
Binding len23
Me-7.587
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure