Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTGCTGCCAGGAAGCCAGCTAGA
..((((((.(((((((((((((&)))))..))))))))..)))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001308278
GeneSymbolSLC14A1
Binding site64,88
Score0.846
Seed1
Au0.485
Energy-22.7
Binding len24
Me-6.013
Phylopstem0.6820929333333333
Phylopflank0.21006768624999997
Longest consecutive pairings8
Position of longest consecutive pairings9
Pairings in 3prime end8
Position5UTR
2D Structure