Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTACATTGCCAGA
..((((((....(((((((...&))))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001308297
GeneSymbolPTPN22
Binding site2855,2869
Score0.808
Seed1
Au0.765
Energy-17.1
Binding len14
Me-13.427
Phylopstem2.2173308714285715
Phylopflank4.683197738750001
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure